Uses of Package
loci.formats

Packages that use loci.formats
loci.formats Bio-Formats: a library for reading and writing popular microscopy file formats. 
loci.formats.codec   
loci.formats.gui   
loci.formats.in   
loci.formats.out   
visad.data.bio Provides data forms for handling common microscopy formats. 
 

Classes in loci.formats used by loci.formats
AxisGuesser
          AxisGuesser guesses which blocks in a file pattern correspond to which dimensional axes (Z, T or C), potentially recommending an adjustment in dimension order within the files, depending on the confidence of each guess.
ClassList
          ClassList is a list of classes for use with ImageReader or ImageWriter, parsed from a configuration file such as readers.txt or writers.txt.
CoreMetadata
          Encompasses core metadata values.
FilePattern
          FilePattern is a collection of methods for handling file patterns, a way of succinctly representing a collection of files meant to be part of the same data series.
FormatException
          FormatException is the exception thrown when something goes wrong performing a file format operation.
FormatHandler
          Abstract superclass of all biological file format readers and writers.
IFormatHandler
          Interface for all biological file format readers and writers.
IFormatReader
          Interface for all biological file format readers.
IFormatWriter
          Interface for all biological file format writers.
IRandomAccess
          Interface for random access into structures (e.g., files or arrays).
Location
          Pseudo-extension of java.io.File that supports reading over HTTP.
Log
          A simple logging class.
MetadataRetrieve
          TODO - MetadataRetrieve javadoc.
MetadataStore
          A proxy whose responsibility it is to marshal biological image data into a particular storage medium.
RandomAccessStream
          RandomAccessStream provides methods for "intelligent" reading of files and byte arrays.
ReaderWrapper
          Abstract superclass of reader logic that wraps other readers.
ReflectedUniverse
          A general-purpose reflection wrapper class.
ReflectException
          ReflectException is the exception thrown when something goes wrong performing a reflected operation with ReflectedUniverse.
StatusEvent
          A event indicating a status update.
StatusListener
          A listener for status updates.
StatusReporter
          Interface for components capable of reporting status updates.
TiffIFDEntry
          This class represents a single raw TIFF IFD entry.
TiffRational
          A rational number (numerator over denominator).
 

Classes in loci.formats used by loci.formats.codec
FormatException
          FormatException is the exception thrown when something goes wrong performing a file format operation.
ReflectedUniverse
          A general-purpose reflection wrapper class.
 

Classes in loci.formats used by loci.formats.gui
IFormatHandler
          Interface for all biological file format readers and writers.
IFormatReader
          Interface for all biological file format readers.
ImageWriter
          ImageWriter is the master file format writer for all supported formats.
 

Classes in loci.formats used by loci.formats.in
FormatException
          FormatException is the exception thrown when something goes wrong performing a file format operation.
FormatHandler
          Abstract superclass of all biological file format readers and writers.
FormatReader
          Abstract superclass of all biological file format readers.
IFormatHandler
          Interface for all biological file format readers and writers.
IFormatReader
          Interface for all biological file format readers.
LegacyQTTools
          Utility class for working with QuickTime for Java.
Location
          Pseudo-extension of java.io.File that supports reading over HTTP.
MetadataStore
          A proxy whose responsibility it is to marshal biological image data into a particular storage medium.
RandomAccessStream
          RandomAccessStream provides methods for "intelligent" reading of files and byte arrays.
ReflectedUniverse
          A general-purpose reflection wrapper class.
ReflectException
          ReflectException is the exception thrown when something goes wrong performing a reflected operation with ReflectedUniverse.
StatusReporter
          Interface for components capable of reporting status updates.
 

Classes in loci.formats used by loci.formats.out
FormatException
          FormatException is the exception thrown when something goes wrong performing a file format operation.
FormatHandler
          Abstract superclass of all biological file format readers and writers.
FormatWriter
          Abstract superclass of all biological file format writers.
IFormatHandler
          Interface for all biological file format readers and writers.
IFormatWriter
          Interface for all biological file format writers.
LegacyQTTools
          Utility class for working with QuickTime for Java.
ReflectedUniverse
          A general-purpose reflection wrapper class.
StatusReporter
          Interface for components capable of reporting status updates.
 

Classes in loci.formats used by visad.data.bio
IFormatHandler
          Interface for all biological file format readers and writers.
IFormatReader
          Interface for all biological file format readers.
IFormatWriter
          Interface for all biological file format writers.